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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU1817Outer membrane lipoprotein, Slp family. (189 aa)    
Predicted Functional Partners:
GSU2299
Cytochrome c; 8 heme-binding sites.
   
    0.604
GSU0183
Peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, SPOR domain-containing.
  
    0.544
GSU1707
Pyridoxal-5'-phosphate-dependent decarboxylase.
   
 
 0.521
GSU3130
Lipoprotein, putative.
  
     0.518
uxs
UDP-glucuronate decarboxylase.
       0.516
ugd
UDP-glucose 6-dehydrogenase.
       0.516
GSU3462
Lipoprotein, putative.
  
     0.513
divIC
Septum formation initiator family protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
       0.494
GSU1811
SPOR domain protein.
 
     0.475
frdA
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
    
   0.436
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.