STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU1944PEP motif-containing protein, putative exosortase substrate. (239 aa)    
Predicted Functional Partners:
GSU2769
Metal-dependent hydrolase, beta-lactamase superfamily.
   
    0.926
ihfA-2
Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
   
    0.878
GSU2590
Hypothetical protein.
   
    0.661
GSU3020
Acyltransferase, left-handed parallel beta-helix (hexapeptide repeat) family, lipoyl attachment domain-containing.
   
    0.631
GSU2132
Hypothetical protein.
   
    0.552
GSU0045
Hypothetical protein.
   
    0.534
GSU1943
PEP motif-containing protein, putative exosortase substrate.
  
    0.507
GSU0953
Lipoprotein, putative.
   
    0.505
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.