STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neuBN-acetylneuraminate synthase. (350 aa)    
Predicted Functional Partners:
GSU1972
N-acetylneuraminate cytidylyltransferase.
 
  
 0.971
GSU1968
Nucleotidyltransferase, CBS domain pair and CBS domain pair-containing.
 
  
 0.935
GSU1975
NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase.
 
  
 0.934
GSU1974
Aminotransferase, AHBA_syn family; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.907
GSU1973
Acyltransferase, left-handed parallel beta-helix (hexapeptide repeat) family.
 
    0.890
GSU1971
Hypothetical protein.
  
  
 0.856
kdsC
3-deoxy-D-manno-octulosonate-8-phosphate phosphatase.
  
 0.753
GSU3020
Acyltransferase, left-handed parallel beta-helix (hexapeptide repeat) family, lipoyl attachment domain-containing.
 
     0.700
GSU1969
Hypothetical protein.
  
    0.690
GSU1976
Glycosyltransferase, YqgM-like family.
  
  
 0.667
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.