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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epsHExopolysaccharide synthesis membrane protein H (exosortase). (290 aa)    
Predicted Functional Partners:
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.990
epsI
Exopolysaccharide synthesis periplasmic protein I.
 
    0.965
GSU1980
Polysaccharide deacetylase and DUF3473 domain protein.
 
    0.951
GSU1981
Hypothetical protein.
 
    0.927
GSU1982
ATPase, putative.
 
    0.915
GSU1941
Sensor histidine kinase, GAF domain-containing; Domains: GAF, HisKA, HATPase_c.
 
  
 0.912
GSU1974
Aminotransferase, AHBA_syn family; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.889
GSU1984
Polysaccharide chain length determinant protein.
 
    0.882
GSU1983
Protein tyrosine kinase, putative.
 
    0.862
GSU1977
Glycosyltransferase, CESA-like subfamily.
 
    0.854
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.