STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU1982ATPase, putative. (388 aa)    
Predicted Functional Partners:
epsH
Exopolysaccharide synthesis membrane protein H (exosortase).
 
    0.915
epsI
Exopolysaccharide synthesis periplasmic protein I.
 
    0.874
GSU1983
Protein tyrosine kinase, putative.
 
    0.860
GSU1984
Polysaccharide chain length determinant protein.
 
    0.860
GSU1980
Polysaccharide deacetylase and DUF3473 domain protein.
 
    0.847
GSU1981
Hypothetical protein.
 
    0.781
GSU1985
Periplasmic polysaccharide biosynthesis/export protein.
 
    0.751
GSU1977
Glycosyltransferase, CESA-like subfamily.
 
    0.750
GSU1986
Undecaprenyl-phosphate glycosylphosphotransferase.
 
    0.742
GSU1987
TPR domain lipoprotein.
 
    0.712
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.