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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU1990Sensor histidine kinase, NtrB-related protein; Domains: HisKA, HATPase_c. (335 aa)    
Predicted Functional Partners:
GSU0831
Nitrogen regulatory protein P-II, putative; Belongs to the P(II) protein family.
  
 0.962
glnB
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
  
 0.962
GSU2134
Nitrogen regulatory protein P-II, putative; Belongs to the P(II) protein family.
  
 0.962
gnfM
Nitrogen fixation master sigma-54-dependent transcriptional response regulator; Domains: REC, sigma54 interaction, HTH8.
 
 0.955
GSU1653
Sigma-54-dependent transcriptional response regulator; Domains: REC, sigma54 interaction, HTH8.
 
 0.955
gnfL
Nitrogen fixation master sensor histidine kinase, PAS domain-containing; Domains: PAS, HisKA, HATPase_c.
 
 
0.928
GSU1555
Sensor histidine kinase response regulator, 5TM, PAS, PAS, GAF and PAS domain-containing; Domains: 5TM, PAS, PAS, GAF, PAS, HisKA, HATPase_c, REC.
 
 
 0.912
GSU1989
Sigma-54-dependent transcriptional response regulator; Domains: REC, sigma54 interaction.
 
 
 0.866
GSU2401
Sensor histidine kinase response regulator, PAS, GAF and PAS domain-containing; Domains: PAS, GAF, PAS, HisKA, HATPase_c, REC.
 
 
 0.828
GSU1529
Sensor histidine kinase response regulator, PAS domain-containing; Domains: PAS, HisKA, HATPase_c, REC.
 
 
 0.817
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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