Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GSU2006Branched-chain amino acid ABC transporter, membrane protein; Belongs to the binding-protein-dependent transport system permease family. (288 aa)    
Predicted Functional Partners:
GSU2007
Branched-chain amino acid ABC transporter, membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
GSU2008
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
 
 0.996
GSU2005
Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative.
 
 
 0.995
GSU2009
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
 
 0.990
livM
Branched-chain amino acid ABC transporter, membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.986
livG
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
 
 0.985
GSU3392
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
 
 0.985
GSU3393
Branched-chain amino acid ABC transporter, membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.980
livF
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
 
 0.972
GSU3391
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
 
 0.971
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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