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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU2010CBS domain pair-containing protein. (144 aa)    
Predicted Functional Partners:
GSU2009
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
    0.916
GSU2008
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
    0.796
rmlB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.786
GSU2007
Branched-chain amino acid ABC transporter, membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
    0.777
ribA
3,4-dihydroxy-2-butanone-4-phosphate synthase and GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.713
GSU2006
Branched-chain amino acid ABC transporter, membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
    0.698
gnnA
UDP-N-acetylglucosamine 3-dehydrogenase, NAD-dependent.
  
  
 0.628
flaG
Flagellar protein FlaG.
  
 
   0.600
guaA
Guanosine-5'-monophosphate synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.588
GSU2005
Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative.
 
    0.543
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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