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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU2013Phosphoglucomutase/phosphomannomutase family protein. (472 aa)    
Predicted Functional Partners:
dacA
Diadenylate cyclase, YbbR and YbbR domain-containing; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
  
 
 0.661
GSU1202
Mannose-1-phosphate guanylyltransferase; Truncated mannose-6-phosphate isomerase domain.
  
  
 0.630
treZ
Maltooligosyltrehalose trehalohydrolase, putative.
 
  
 0.628
galU
Glucose-1-phosphate uridylyltransferase.
  
 
 0.586
GSU0371
Alpha-glucan phosphorylase.
  
 
 0.581
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.581
GSU1849
Hypothetical protein.
  
  
 0.563
nifU
Nitrogen fixation iron-sulfur cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
    0.556
GSU1702
ROK domain transcriptional regulator/sugar kinase.
 
  
 0.552
GSU2248
Hypothetical protein.
  
  
 0.542
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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