Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GSU2016Sensor diguanylate cyclase/phosphodiesterase, PAS domain-containing; Domains: PAS, GGDEF, EAL. (799 aa)    
Predicted Functional Partners:
GSU1655
Response receiver sensor histidine kinase response regulator, PAS and GAF domain-containing; Domains: REC, PAS, GAF, HisKA, HATPase_c, REC.
  
 
 0.957
GSU0149
Motility response receiver histidine kinase; Domains: REC, HisKA, HATPase_c.
  
 
 0.924
GSU1555
Sensor histidine kinase response regulator, 5TM, PAS, PAS, GAF and PAS domain-containing; Domains: 5TM, PAS, PAS, GAF, PAS, HisKA, HATPase_c, REC.
  
 
 0.921
GSU0537
Sensor diguanylate cyclase/phosphodiesterase, PAS domain-containing; Domains: PAS, GGDEF, EAL.
 
 
0.919
GSU1302
Sensor histidine kinase response regulator, HAMP domain-containing, putative heme-binding site; Domains: HAMP, HisKA, HATPase_c, REC.
  
 
 0.917
GSU1870
Sensor diguanylate cyclase, GAF domain-containing; Domains: GAF, GGDEF.
 
 
 
0.911
GSU3263
Response regulator, PilZ domain-containing; Domains: REC, PilZ.
  
 
 0.906
GSU0946
Sensor diguanylate cyclase/phosphodiesterase, HAMP and PAS domain-containing; Domains: HAMP, PAS, GGDEF, EAL.
 
 
0.904
GSU0718
Sensor histidine kinase response receiver, PAS domain-containing; Domains: PAS, HisKA, HATPase_c, REC.
  
 
 0.898
GSU1285
Sensor histidine kinase response regulator, PAS and PAS domain-containing; Domains: PAS, PAS, HisKA, HATPase_c, REC.
  
 
 0.898
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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