STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU2062Response receiver-modulated nucleotide cyclase, GGDEF-related domain-containing; Domains: REC, GGDEF-related. (306 aa)    
Predicted Functional Partners:
GSU3549
Hypothetical protein.
 
     0.853
GSU0537
Sensor diguanylate cyclase/phosphodiesterase, PAS domain-containing; Domains: PAS, GGDEF, EAL.
 
 0.849
GSU2063
Metal-dependent phosphohydrolase, HDOD domain-containing; Domains: HDOD.
 
    0.847
GSU0946
Sensor diguanylate cyclase/phosphodiesterase, HAMP and PAS domain-containing; Domains: HAMP, PAS, GGDEF, EAL.
 
 0.842
GSU2511
Sensor diguanylate cyclase/phosphodiesterase, CHASE4 and PAS domain-containing; Domains: CHASE4, PAS, GGDEF, EAL.
 
 0.840
GSU2016
Sensor diguanylate cyclase/phosphodiesterase, PAS domain-containing; Domains: PAS, GGDEF, EAL.
 
 0.810
GSU2534
Response receiver sensor diguanylate cyclase, PAS domain-containing; Domains: REC, PAS, GGDEF.
 
 
 0.796
GSU1037
Response receiver-modulated diguanylate cyclase/phosphodiesterase; Domains: REC, GGDEF, EAL.
  
 0.792
GSU2044
Sensor diguanylate cyclase/phosphodiesterase, GAF and PAS domain-containing; Domains: GAF, PAS, GGDEF, EAL.
 
 0.770
GSU0808
Diguanylate cyclase, CAP_ED domain-containing; Domains: CAP_ED, GGDEF.
 
 
 0.759
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.