STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mreCCell shape-determining protein MreC; Involved in formation and maintenance of cell shape. (274 aa)    
Predicted Functional Partners:
mreD
Cell shape-determining protein MreD, putative.
  
 
 0.993
mreB-1
Cell shape-determining protein MreB.
 
 
 0.987
mreB-2
Cell shape-determining protein MreB.
 
 
 0.982
mrdA
Peptidoglycan transpeptidase.
 
 
 0.980
rodA
Cell shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
  
 0.968
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
 
  
 0.886
GSU0386
Protein of unknown function DUF2466; Belongs to the UPF0758 family.
  
  
 0.773
GSU2168
Protein of unknown function DUF2466; Belongs to the UPF0758 family.
  
  
 0.772
ftsI
Peptidoglycan transglycosylase and transpeptidase FtsI.
 
 
 0.751
GSU2458
Transpeptidase.
 
 
 0.743
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.