Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GSU2124Thioredoxin-related domain protein. (279 aa)    
Predicted Functional Partners:
GSU2125
TraH domain protein.
 
    0.937
GSU2122
TraG family protein.
 
    0.913
GSU2121
SLT domain lytic transglycosylase.
 
    0.881
GSU2123
Metal-dependent phosphohydrolase; Domains: HDc.
  
    0.826
GSU2154
Hypothetical protein.
  
  
 0.788
groEL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.784
GSU2002
FAD-dependent pyridine nucleotide-disulfide oxidoreductase family protein.
 
 
 0.775
GSU2161
Hypothetical protein.
  
    0.752
GSU2152
Hypothetical protein.
  
    0.721
GSU2160
Protein of unknown function DUF3150.
  
 
 0.719
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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