Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GSU2152Hypothetical protein. (318 aa)    
Predicted Functional Partners:
GSU2154
Hypothetical protein.
 
    0.925
GSU2167
CHC2 zinc finger domain protein.
 
    0.784
GSU1306
Phosphotransferase, PolIIIAc domain-containing, putative.
  
    0.771
GSU2125
TraH domain protein.
  
    0.749
GSU2155
Hypothetical protein.
  
    0.745
GSU0269
Hypothetical protein.
  
    0.737
GSU2153
Hypothetical protein.
  
    0.737
GSU3416
[lipopolysaccharide]-lipid A 3-O-deacylase outer membrane protein, PagL family.
  
     0.730
GSU2124
Thioredoxin-related domain protein.
  
    0.721
GSU2118
Integrative genetic element Gsu21, integrase; Belongs to the 'phage' integrase family.
  
    0.682
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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