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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU2249Hypothetical protein. (390 aa)    
Predicted Functional Partners:
GSU2250
Glycosyltransferase, group 1 family protein.
  
    0.822
GSU2251
Hypothetical protein.
  
    0.635
GSU2248
Hypothetical protein.
  
    0.626
GSU2252
ADP-heptose--lipopolysaccharide heptosyltransferase.
  
    0.625
GSU2253
Glycosyltransferase, YqgM-like family.
       0.620
GSU2244
Glycosyltransferase.
  
    0.613
wbjB
UDP-N-acetylglucosamine 4,6-dehydratase and UDP-2-acetamido-2,6-dideoxy-alpha-D-xylo-4-hexulose 5-epimerase.
  
    0.560
GSU2247
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
    0.558
GSU2254
UDP-glucose--lipopolysaccharide core heptose I 4-beta-glucosyltransferase.
       0.556
GSU2245
UDP-2-acetamido-2,6-dideoxy-beta-L-mannose 2-epimerase, putative; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
    0.533
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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