STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aplCSodium/solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (658 aa)    
Predicted Functional Partners:
GSU2353
Protein of unknown function DUF485.
 
  
 0.971
GSU1071
Protein of unknown function DUF485.
 
  
 0.894
GSU1069
Protein of unknown function DUF485.
 
  
 0.878
GSU1067
Nucleotidyltransferase DUF294, putative.
 
  
 0.796
GSU0517
Nucleotidyltransferase DUF294, putative.
 
    0.643
gltA
Citrate synthase; Belongs to the citrate synthase family.
  
  
 0.554
GSU2354
Helix-turn-helix transcriptional regulator, IclR family.
       0.505
GSU3571
Hypothetical protein.
       0.500
maeB
Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing.
   
  
 0.459
acnB
Aconitate hydratase 2; Belongs to the aconitase/IPM isomerase family.
  
   
 0.435
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.