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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copACopper-translocating P-type ATPase. (797 aa)    
Predicted Functional Partners:
GSU2147
Heavy metal-translocating P-type ATPase.
 
 
0.935
GSU1338
Heavy metal transport/detoxification domain protein.
 
 
 0.931
GSU2453
Membrane protein, UPF0118 superfamily.
 
    0.816
GSU2454
Membrane protein, UPF0118 superfamily.
 
    0.812
mreD
Cell shape-determining protein MreD, putative.
     
 0.800
selR
Peptide methionine sulfoxide reductase, R-isomer-specific; Belongs to the MsrB Met sulfoxide reductase family.
  
  
 0.793
GSU2450
Hydrolase, putative.
  
    0.775
GSU2455
Hypothetical protein.
       0.723
ompC
Multicopper oxidase, manganese oxidase family.
  
 
 0.718
GSU1252
Multicopper oxidase with phosphopantotheine attachment site.
  
 
 0.692
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.