Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
GSU2467Integrase domain protein; Belongs to the 'phage' integrase family. (457 aa)    
Predicted Functional Partners:
GSU0124
Amidophosphoribosyltransferase, putative.
   
    0.636
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
      
 0.636
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.626
tyrA
Prephenate dehydrogenase.
  
    0.561
GSU2468
Hypothetical protein.
  
    0.551
GSU0040
Protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family.
   
    0.544
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
    
 
 0.481
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
    
 
 0.478
rpsU-2
Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
   
 
 0.478
GSU1362
Hypothetical protein.
   
    0.474
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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