STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU2624Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (331 aa)    
Predicted Functional Partners:
GSU1435
Peptide ABC transporter, membrane protein.
 
 0.999
GSU1434
Peptide ABC transporter, membrane protein.
 0.996
GSU1433
Peptide ABC transporter, periplasmic peptide-binding lipoprotein.
 
 
 0.986
GSU2623
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.984
flgC
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
 
 0.534
GSU2622
Sensor cyclic diguanylate phosphodiesterase, HAMP and GAF domain-containing heme-binding site; Domains: HAMP, GAF, HD-GYP.
       0.529
GSU2625
Helix-turn-helix transcriptional regulator, ArsR family.
  
    0.522
GSU2626
SAM-dependent methyltransferase, PUA domain-containing.
 
     0.468
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.