STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU2726Hypothetical protein. (431 aa)    
Predicted Functional Partners:
GSU2724
Cytochrome c; 15 heme-binding sites.
  
  
 0.883
GSU2725
Lipoprotein cytochrome c; 5 heme-binding sites.
  
    0.799
yedY
Periplasmic sulfoxide reductase, catalytic subunit, molybdopterin-binding protein.
  
  
 0.708
GSU1014
Smr domain protein.
   
    0.636
GSU2939
Outer membrane channel, putative.
      
 0.600
GSU2733
Hypothetical protein.
      
 0.598
GSU2940
Rhodanese homology domain pair protein.
      
 0.598
GSU2642
Lipoprotein cytochrome c; 6 heme-binding sites.
      
 0.595
GSU2645
Cytochrome c; 12 heme-binding sites.
      
 0.594
GSU2936
Hypothetical protein.
      
 0.594
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.