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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU2811Cytochrome c; 2 heme-binding sites. (467 aa)    
Predicted Functional Partners:
ccpA
Cytochrome c peroxidase; 2 heme-binding sites.
  
  
 0.941
GSU2812
Glutaredoxin family protein.
  
    0.738
GSU2513
Lipoprotein cytochrome c, 1 heme-binding site.
  
  
 0.675
GSU3254
Mannose-1-phosphate guanylyltransferase and mannose-6-phosphate isomerase-related protein.
   
    0.636
GSU1253
Hypothetical protein.
 
 
 0.607
tolB
Biopolymer transport periplasmic beta-propeller repeat protein, TolB-related protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
   0.517
GSU2505
Hypothetical protein.
  
 
 0.517
GSU1646
Lipoprotein, putative.
  
   0.516
GSU0044
Hypothetical protein.
  
 
 0.514
GSU0617
NHL repeat domain lipoprotein.
  
 
 0.513
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.