STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU2814Rubrerythrin. (190 aa)    
Predicted Functional Partners:
GSU3188
Rubredoxin.
 
  
 0.820
GSU0847
Rubredoxin.
  
  
 0.796
fur-4
Transcriptional regulator, Fur family; Belongs to the Fur family.
  
  
 0.722
ccpA
Cytochrome c peroxidase; 2 heme-binding sites.
  
  
 0.694
GSU3289
Ferritin-like domain protein.
  
  
 0.675
GSU3293
Ferritin-like domain protein.
  
  
 0.675
roo
Rubredoxin:oxygen/nitric oxide oxidoreductase.
 
  
 0.652
GSU2929
Hemerythrin family protein.
      
 0.648
katG
Catalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.637
GSU0402
Hemerythrin family protein.
      
 0.616
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.