STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU2911Hypothetical protein. (833 aa)    
Predicted Functional Partners:
GSU0368
Outer membrane surface lipoprotein.
 
 
 0.940
yaeT
Outer membrane protein assembly complex protein YaeT; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.874
GSU0181
Peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, TPR domain-containing.
   
 
 0.832
yfiO
Outer membrane protein assembly lipoprotein YfiO, putative; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.832
GSU2910
Hypothetical protein.
  
    0.827
GSU2906
Cupin superfamily barrel domain protein.
 
    0.821
omcN
Lipoprotein cytochrome c; 34 heme-binding sites.
 
    0.815
GSU2904
Iron-sulfur cluster-binding oxidoreductase.
 
    0.812
GSU2907
Membrane protein DUF318.
 
    0.811
GSU2914
NHL repeat domain protein.
 
  
 0.791
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.