Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GSU3003Hypothetical protein. (171 aa)    
Predicted Functional Partners:
GSU2998
Hypothetical protein.
  
    0.780
cbiMN
Cobalt ABC transporter, membrane protein CbiMN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
    0.778
cbiX
Sirohydrochlorin cobaltochelatase.
  
    0.775
cbiD
cobalt-precorrin-5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
  
    0.773
cbiC
cobalt-precorrin-8X methylmutase.
  
    0.773
cbiO
Cobalt ABC transporter, ATP-binding protein; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
  
    0.773
cbiQ
Cobalt ABC transporter, membrane protein CbiQ.
  
    0.773
cbiL
Cobalt-sirohydrochlorin C20-methyltransferase; Belongs to the precorrin methyltransferase family.
       0.634
cbiET
cobalt-precorrin-6B C5,C15-methyltransferase and C12-decarboxylase.
  
    0.634
thiC-2
4-amino-5-hydroxymethyl-2-methylpyrimidine- phosphate synthase; Catalyzes the conversion of aminoimidazole ribotide (AIR) to 5-hydroxybenzimidazole (5-HBI) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Is thus involved in the anaerobic biosynthesis of the benzimidazole lower axial ligand of the cobamide produced by G.sulfurreducens; Belongs to the ThiC family. 5-hydroxybenzimidazole synthase subfamily.
  
    0.568
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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