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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU3151Hypothetical protein. (217 aa)    
Predicted Functional Partners:
GSU3150
HPP family protein.
  
    0.670
imcH
Cytochrome c; Redox protein involved in a high-potential metal respiratory pathway. Is required only for electron transfer to terminal extracellular electron acceptors with redox potentials higher than -0.1 V. ImcH likely transfers electrons from the quinone pool to a periplasmic acceptor.
  
     0.662
GSU3152
PAS domain protein.
  
    0.618
GSU1556
Lipoprotein, putative.
  
    0.558
GSU2210
Cytochrome c; 27 heme-binding sites.
  
    0.532
GSU0702
Lipoprotein cytochrome c; 35 heme-binding sites.
  
     0.508
GSU2489
Magnesium-dependent deoxyribonuclease, TatD family, and radical SAM domain iron-sulfur oxidoreductase.
   
    0.483
GSU3148
Sensor histidine kinase, GAF domain-containing; Domains: GAF, HisKA, HATPase_c.
       0.429
GSU1787
Cytochrome c; 4 heme-binding sites.
  
     0.428
omcN
Lipoprotein cytochrome c; 34 heme-binding sites.
  
    0.421
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.