Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cheY44HResponse receiver CheY associated with MCPs of class 44H. (121 aa)    
Predicted Functional Partners:
cheC44H
Protein phosphoaspartate phosphatase CheC associated with MCPs of class 44H.
 
 0.996
cheA44H
Sensor histidine kinase CheA associated with MCPs of class 44H.
 
 0.990
mcp44H
Methyl-accepting chemotaxis sensory transducer, class 44H.
 
 
  0.966
cheW44H
Scaffold protein CheW associated with MCPs of class 44H.
  
 
 0.932
fliN
Flagellar motor switch protein FliN.
  
 
  0.926
cheX40H
Protein phosphoaspartate phosphatase CheX associated with MCPs of class 40H.
  
 
 0.905
cheX64H
Protein phosphoaspartate phosphatase CheX associated with MCPs of classes 40H and 40+24H.
  
 
 0.905
cheA40H
Sensor histidine kinase CheA associated with MCPs of class 40H.
 
 0.887
cheD44H
Probable chemoreceptor glutamine deamidase CheD 3; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
    0.882
cheA64H
Sensor histidine kinase CheA associated with MCPs of classes 40H and 40+24H.
 
 0.870
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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