STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU3216Sensor histidine kinase; Domains: HATPase_c. (372 aa)    
Predicted Functional Partners:
GSU3217
Sigma-54-dependent transcriptional response regulator; Domains: REC, sigma54 interaction, HTH8.
 
 
 0.890
GSU1555
Sensor histidine kinase response regulator, 5TM, PAS, PAS, GAF and PAS domain-containing; Domains: 5TM, PAS, PAS, GAF, PAS, HisKA, HATPase_c, REC.
 
 
 0.874
GSU3215
Hypothetical protein.
       0.773
GSU3218
Cytochrome c; 15 heme-binding sites.
  
    0.765
GSU2401
Sensor histidine kinase response regulator, PAS, GAF and PAS domain-containing; Domains: PAS, GAF, PAS, HisKA, HATPase_c, REC.
 
 
 0.741
GSU1529
Sensor histidine kinase response regulator, PAS domain-containing; Domains: PAS, HisKA, HATPase_c, REC.
 
 
 0.686
GSU2534
Response receiver sensor diguanylate cyclase, PAS domain-containing; Domains: REC, PAS, GGDEF.
  
   0.661
GSU1039
Sigma-54-dependent sensor transcriptional response regulator, PAS domain-containing; Domains: REC, PAS, sigma54 interaction, HTH8.
 
 
 0.642
GSU1316
Response regulator sensor, GAF domain-containing; Domains: REC, GAF.
  
 
 0.642
GSU1655
Response receiver sensor histidine kinase response regulator, PAS and GAF domain-containing; Domains: REC, PAS, GAF, HisKA, HATPase_c, REC.
 
 
 
 0.636
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.