Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GSU3232Cytochrome c, 1 heme-binding site. (121 aa)    
Predicted Functional Partners:
GSU3233
Cytochrome c; 7 heme-binding sites.
  
  
 0.866
mcp40H-5
Methyl-accepting chemotaxis sensory transducer, class 40H, Cache_2 domain-containing.
   
    0.615
GSU3228
Cytochrome c; 7 heme-binding sites.
   
  
 0.602
GSU2725
Lipoprotein cytochrome c; 5 heme-binding sites.
   
  
 0.587
GSU1785
Cytochrome c; 4 heme-binding sites.
      
 0.585
ihfB-2
Integration host factor, beta subunit; Belongs to the bacterial histone-like protein family.
   
  
 0.584
GSU3274
Cytochrome c, 1 heme-binding site.
      
 0.583
omcH
Cytochrome c; 24 heme-binding sites.
   
  
 0.580
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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