STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU3251Protein of unknown function, DUF523 and DUF1722. (315 aa)    
Predicted Functional Partners:
GSU3252
Sensor histidine kinase, GAF domain-containing; Domains: GAF, HisKA, HATPase_c.
  
    0.960
GSU2829
Deoxyribodipyrimidine photolyase, putative.
  
  
 0.926
GSU2348
Hypothetical protein.
   
    0.621
GSU3254
Mannose-1-phosphate guanylyltransferase and mannose-6-phosphate isomerase-related protein.
       0.528
trxB
Thioredoxin reductase.
   
   0.506
GSU2002
FAD-dependent pyridine nucleotide-disulfide oxidoreductase family protein.
   
   0.506
GSU3253
Response regulator, putative; Domains: REC.
  
    0.494
GSU2320
Hypothetical protein.
 
  
 0.493
GSU1727
Zinc finger transcriptional regulator, TraR/DksA family.
   
    0.487
GSU1674
Hypothetical protein.
   
    0.483
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.