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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU3271Outer membrane channel, OprB family. (469 aa)    
Predicted Functional Partners:
GSU0360
Peptidoglycan-binding outer membrane protein, OMP_b-brl and OmpA domain-containing; Domains: OMP_b-brl, OmpA.
   
 
 0.701
GSU0810
Peptidoglycan-binding outer membrane protein, OMP_b-brl, OmpA and OmpA domain-containing; Domains: OMP_b-brl, OmpA, OmpA.
   
 
 0.701
feoB-2
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
  
  
 0.692
GSU3270
FeoA family protein.
  
    0.631
GSU1569
Transcriptional repressor, HgtR-related protein.
   
  
 0.595
GSU3269
FeoA family protein.
  
    0.595
ppcA
Cytochrome c; 3 heme-binding sites.
      
 0.592
imcH
Cytochrome c; Redox protein involved in a high-potential metal respiratory pathway. Is required only for electron transfer to terminal extracellular electron acceptors with redox potentials higher than -0.1 V. ImcH likely transfers electrons from the quinone pool to a periplasmic acceptor.
      
 0.592
GSU2642
Lipoprotein cytochrome c; 6 heme-binding sites.
      
 0.591
GSU2733
Hypothetical protein.
      
 0.591
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.