Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GSU3271Outer membrane channel, OprB family. (469 aa)    
Predicted Functional Partners:
feoB-2
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
  
  
 0.696
GSU3270
FeoA family protein.
  
    0.638
GSU3221
Cytochrome c; 4 heme-binding sites.
   
  
 0.606
GSU3269
FeoA family protein.
  
    0.595
GSU3267
Hypothetical protein.
  
    0.588
ppcA
Cytochrome c; 3 heme-binding sites.
      
 0.581
imcH
Cytochrome c; Redox protein involved in a high-potential metal respiratory pathway. Is required only for electron transfer to terminal extracellular electron acceptors with redox potentials higher than -0.1 V. ImcH likely transfers electrons from the quinone pool to a periplasmic acceptor.
      
 0.581
GSU2515
Cytochrome c, 1 heme-binding site.
      
 0.580
omcP
Cytochrome c; 4 heme-binding sites.
   
  
 0.580
GSU2940
Rhodanese homology domain pair protein.
      
 0.580
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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