Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GSU0907 | GSU3288 | GSU0907 | GSU3288 | ThiF family protein. | YgdL family protein. | 0.439 |
GSU0907 | thiG | GSU0907 | GSU0588 | ThiF family protein. | Carboxythiazole phosphate tautomer synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.886 |
GSU2227 | GSU3288 | GSU2227 | GSU3288 | Radical SAM domain iron-sulfur cluster-binding oxidoreductase. | YgdL family protein. | 0.558 |
GSU3287 | GSU3288 | GSU3287 | GSU3288 | Magnesium-dependent deoxyribonuclease, TatD family. | YgdL family protein. | 0.749 |
GSU3287 | GSU3289 | GSU3287 | GSU3289 | Magnesium-dependent deoxyribonuclease, TatD family. | Ferritin-like domain protein. | 0.482 |
GSU3287 | hemD | GSU3287 | GSU3286 | Magnesium-dependent deoxyribonuclease, TatD family. | Uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen III synthase. | 0.728 |
GSU3288 | GSU0907 | GSU3288 | GSU0907 | YgdL family protein. | ThiF family protein. | 0.439 |
GSU3288 | GSU2227 | GSU3288 | GSU2227 | YgdL family protein. | Radical SAM domain iron-sulfur cluster-binding oxidoreductase. | 0.558 |
GSU3288 | GSU3287 | GSU3288 | GSU3287 | YgdL family protein. | Magnesium-dependent deoxyribonuclease, TatD family. | 0.749 |
GSU3288 | GSU3289 | GSU3288 | GSU3289 | YgdL family protein. | Ferritin-like domain protein. | 0.541 |
GSU3288 | hemD | GSU3288 | GSU3286 | YgdL family protein. | Uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen III synthase. | 0.578 |
GSU3288 | thiG | GSU3288 | GSU0588 | YgdL family protein. | Carboxythiazole phosphate tautomer synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.491 |
GSU3289 | GSU3287 | GSU3289 | GSU3287 | Ferritin-like domain protein. | Magnesium-dependent deoxyribonuclease, TatD family. | 0.482 |
GSU3289 | GSU3288 | GSU3289 | GSU3288 | Ferritin-like domain protein. | YgdL family protein. | 0.541 |
GSU3289 | hemD | GSU3289 | GSU3286 | Ferritin-like domain protein. | Uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen III synthase. | 0.416 |
hemD | GSU3287 | GSU3286 | GSU3287 | Uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen III synthase. | Magnesium-dependent deoxyribonuclease, TatD family. | 0.728 |
hemD | GSU3288 | GSU3286 | GSU3288 | Uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen III synthase. | YgdL family protein. | 0.578 |
hemD | GSU3289 | GSU3286 | GSU3289 | Uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen III synthase. | Ferritin-like domain protein. | 0.416 |
thiG | GSU0907 | GSU0588 | GSU0907 | Carboxythiazole phosphate tautomer synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | ThiF family protein. | 0.886 |
thiG | GSU3288 | GSU0588 | GSU3288 | Carboxythiazole phosphate tautomer synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | YgdL family protein. | 0.491 |