STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU3329Radical SAM domain iron-sulfur cluster-binding oxidoreductase. (431 aa)    
Predicted Functional Partners:
GSU3328
Hypothetical protein.
 
  
 0.961
GSU3330
NADH-dependent flavin oxidoreductase, Oye family.
  
    0.581
GSU3326
Protein of unknown function DUF1847.
  
    0.569
GSU3327
Protein of unknown function DUF2288.
  
    0.546
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
    0.504
GSU3332
Lipoprotein cytochrome c; 2 heme-binding sites.
       0.454
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.