Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GSU0709 | GSU1166 | GSU0709 | GSU1166 | Hypothetical protein. | TPR domain protein. | 0.819 |
GSU0709 | GSU1677 | GSU0709 | GSU1677 | Hypothetical protein. | Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein. | 0.544 |
GSU0709 | GSU3191 | GSU0709 | GSU3191 | Hypothetical protein. | TPR domain protein. | 0.852 |
GSU0709 | GSU3435 | GSU0709 | GSU3435 | Hypothetical protein. | Ankyrin repeat protein. | 0.920 |
GSU1166 | GSU0709 | GSU1166 | GSU0709 | TPR domain protein. | Hypothetical protein. | 0.819 |
GSU1166 | GSU3191 | GSU1166 | GSU3191 | TPR domain protein. | TPR domain protein. | 0.411 |
GSU1166 | GSU3435 | GSU1166 | GSU3435 | TPR domain protein. | Ankyrin repeat protein. | 0.871 |
GSU1166 | dnaK | GSU1166 | GSU0033 | TPR domain protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.847 |
GSU1166 | nuoBCD | GSU1166 | GSU3444 | TPR domain protein. | NADH dehydrogenase I, B/C/D subunits; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 20 kDa subunit family. In the C-terminal section; belongs to the complex I 49 [...] | 0.427 |
GSU1677 | GSU0709 | GSU1677 | GSU0709 | Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein. | Hypothetical protein. | 0.544 |
GSU1677 | GSU3191 | GSU1677 | GSU3191 | Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein. | TPR domain protein. | 0.727 |
GSU1677 | GSU3435 | GSU1677 | GSU3435 | Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein. | Ankyrin repeat protein. | 0.977 |
GSU1677 | dnaK | GSU1677 | GSU0033 | Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.553 |
GSU1677 | gmk | GSU1677 | GSU2238 | Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.857 |
GSU1677 | hrpB | GSU1677 | GSU1838 | Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein. | ATP-dependent helicase HrpB. | 0.505 |
GSU1677 | nuoBCD | GSU1677 | GSU3444 | Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein. | NADH dehydrogenase I, B/C/D subunits; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 20 kDa subunit family. In the C-terminal section; belongs to the complex I 49 [...] | 0.999 |
GSU1677 | sbcD-1 | GSU1677 | GSU1421 | Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein. | DNA repair exonuclease SbcCD, D subunit, putative. | 0.709 |
GSU1677 | sbcD-2 | GSU1677 | GSU1724 | Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein. | DNA repair exonuclease SbcCD, D subunit, putative. | 0.711 |
GSU3191 | GSU0709 | GSU3191 | GSU0709 | TPR domain protein. | Hypothetical protein. | 0.852 |
GSU3191 | GSU1166 | GSU3191 | GSU1166 | TPR domain protein. | TPR domain protein. | 0.411 |
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