STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSU3624Rubredoxin. (36 aa)    
Predicted Functional Partners:
fur-4
Transcriptional regulator, Fur family; Belongs to the Fur family.
  
  
 0.922
GSU3293
Ferritin-like domain protein.
  
  
 0.870
GSU3289
Ferritin-like domain protein.
  
  
 0.695
roo
Rubredoxin:oxygen/nitric oxide oxidoreductase.
  
  
 0.687
GSU2612
Rubrerythrin.
     
 0.611
GSU2814
Rubrerythrin.
     
 0.611
GSU0847
Rubredoxin.
  
  
 0.608
GSU3188
Rubredoxin.
  
  
 0.608
GSU0720
Desulfoferrodoxin, putative.
  
  
 0.589
GSU0528
Ferredoxin and NADH nitroreductase domain protein.
 
  
 0.572
Your Current Organism:
Geobacter sulfurreducens
NCBI taxonomy Id: 243231
Other names: G. sulfurreducens PCA, Geobacter sulfurreducens PCA, Geobacter sulfurreducens str. PCA, Geobacter sulfurreducens strain PCA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.