STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
MJ_0011Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0011. (197 aa)    
Predicted Functional Partners:
MJ_1337
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1337.
 
    0.985
MJ_0008
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0008.
  
    0.885
apgM2
BcpC phosphonopyruvate decarboxylase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
 
     0.800
MJ_0009
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0009.
       0.774
MJ_1590
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1590.
  
    0.735
MJ_0007
2-hydroxyglutaryl-CoA dehydratase, subunit beta (hgdB); Similar to GB:X14252 SP:P11570 PID:38802 percent identity: 22.79; identified by sequence similarity; putative.
 
    0.699
nnr
Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (By similarity). In the N-terminal section; belongs to the NnrE/AIBP family.
  
    0.407
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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