Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0014Conserved hypothetical protein; Similar to SP:Q10831 PID:1403406 PID:1403406 percent identity: 27.27; identified by sequence similarity; putative. (213 aa)    
Predicted Functional Partners:
MJ_0013
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0013.
  
  
 0.818
MJ_0751
Conserved hypothetical protein; Similar to GP:1707749 percent identity: 33.56; identified by sequence similarity; putative; In the N-terminal section; belongs to the transposase 2 family.
 
  
 0.663
MJ_1635
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1635; In the N-terminal section; belongs to the transposase 2 family.
 
  
 0.656
MJ_0015
Conserved hypothetical protein; Similar to GB:L42023 SP:P46452 PID:1161410 PID:1220701 PID:1204873 percent identity: 54.55; identified by sequence similarity; putative.
       0.569
MJ_1333.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ1333.1.
 
   
 0.408
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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