STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frhBCoenzyme F420-reducing hydrogenase, beta subunit (frhB); Reduces the physiological low-potential two-electron acceptor coenzyme F420, and the artificial one-electron acceptor methylviologen. Belongs to the FrhB family. (287 aa)    
Predicted Functional Partners:
frhG
Coenzyme F420-reducing hydrogenase, gamma subunit; Reduces the physiological low-potential two-electron acceptor coenzyme F420, and the artificial one-electron acceptor methylviologen.
 0.999
MJ_0727
Coenzyme F420-reducing hydrogenase, alpha subunit; Similar to GB:J02914 SP:P19496 PID:551889 GB:AE000666 percent identity: 27.08; identified by sequence similarity; putative.
 
 0.992
frhD
Coenzyme F420-reducing hydrogenase, delta subunit (frcD); Similar to GB:X61202 PID:44706 percent identity: 65.70; identified by sequence similarity; putative; Belongs to the peptidase A31 family.
 
 
 0.990
MJ_0726
Coenzyme F420-reducing hydrogenase, gamma subunit; Similar to GB:X61201 PID:809730 SP:Q00393 percent identity: 43.53; identified by sequence similarity; putative; Belongs to the FrhG family.
 
 0.989
mer
N5,N10-methylene-tetrahydromethanopterin reductase (mer); Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family.
 
 
 0.963
fwdA
Formylmethanofuran dehydrogenase, subunit A (tungsten) (fwdA); Similar to PID:871462 GB:AE000666 PID:1890210 percent identity: 68.95; identified by sequence similarity; putative; Belongs to the metallo-dependent hydrolases superfamily. FwdA/FmdA family.
  
 
 0.934
MJ_0253
Coenzyme F420-reducing hydrogenase, delta subunit (frcD); Similar to GB:X61201 PID:44702 percent identity: 45.45; identified by sequence similarity; putative; Belongs to the peptidase A31 family.
  
 
 0.929
mtd
N5,N10-methylene-tetrahydromethanopterin dehydrogenase (mtd); Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT.
   
 
 0.917
MJ_1349
Coenzyme F420-reducing hydrogenase, beta subunit; Similar to GB:X61201 PID:809731 SP:Q00391 percent identity: 35.74; identified by sequence similarity; putative; Belongs to the FrhB family.
  
  
0.915
vhuA
Methylviologen-reducing hydrogenase, alpha chain (vhuA); Similar to GB:X61204 PID:44799 PID:1747408 percent identity: 77.03; identified by sequence similarity; putative.
 
 
 0.910
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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