STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
relE1Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. Its cognate antitoxin is RelB1 (Potential). (90 aa)    
Predicted Functional Partners:
relB1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. Its cognate toxin is RelE1 (Potential).
   
 
 0.946
relB4
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. Its cognate toxin is RelE4 (Potential).
  
    0.697
argB
Acetylglutamate kinase (argB); Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
       0.598
MJ_0072
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0072.
       0.567
MJ_0073
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0073.
       0.497
MJ_0068
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 52.63; identified by sequence similarity; putative; Belongs to the UPF0212 family.
       0.418
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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