STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0085Iron transport periplasmic binding protein, putative (ceuE); Similar to PID:1107531 percent identity: 25.10; identified by sequence similarity; putative. (373 aa)    
Predicted Functional Partners:
MJ_0087
Hemin permease (hemU); Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.983
MJ_0089
Ferric enterobactin transport ATP-binding protein; Similar to SP:P23878 GB:X57471 PID:41432 GB:U00096 PID:1778504 percent identity: 33.07; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
 
 0.979
MJ_0086
Unspecified methyltransferase; Similar to PIR:S21265 percent identity: 25.50; identified by sequence similarity; putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
 
    0.899
MJ_0873
Ferric enterobactin transport ATP-binding protein; Similar to SP:P23878 GB:X57471 PID:41432 GB:U00096 PID:1778504 percent identity: 35.86; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
  
 
 0.861
MJ_0874
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0874; To B.subtilis YdcN C-terminal region.
  
 
 0.845
MJ_0876
iron(III) dicitrate transport system permease protein; Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.797
MJ_0084
CODH nickel-insertion accessory protein (cooC); Similar to GP:1498749 percent identity: 33.33; identified by sequence similarity; putative.
 
     0.722
MJ_0088
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0088.
       0.550
MJ_0500
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 25.14; identified by sequence similarity; putative.
 
    0.473
hemA
glutamyl-tRNA reductase (hemA); Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
  
 0.460
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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