STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0096Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0096. (262 aa)    
Predicted Functional Partners:
MJ_0095
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0095.
       0.912
eif2b
Translation initiation factor aIF-2, subunit beta, putative (aIF2B); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-beta/eIF-5 family.
       0.884
MJ_0505
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0505.
   
    0.824
MJ_0420
O-antigen polymerase isolog; Similar to GB:M60066 SP:P26479 PID:154343 percent identity: 26.15; identified by sequence similarity; putative.
   
    0.820
rpl37e
LSU ribosomal protein L37E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family.
       0.805
MJ_0094
Methyl coenzyme M reductase II, operon protein C (mtrC); Similar to GB:M16893 SP:P07960 PID:150057 percent identity: 31.15; identified by sequence similarity; putative.
       0.552
MJ_0296
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0296.
   
    0.507
bioB
Biotin synthetase (bioB); Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
   
    0.472
MJ_0871
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 39.58; identified by sequence similarity; putative.
   
    0.465
MJ_0670
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 37.37; identified by sequence similarity; putative.
   
    0.463
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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