STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0141Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 36.84; identified by sequence similarity; putative; Belongs to the M.jannaschii MJ0126/MJ0128/MJ0141/MJ0435/MJ0604/MJ1215/MJ1217/MJ1305/MJ1379 family. (99 aa)    
Predicted Functional Partners:
MJ_0142
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 29.84; identified by sequence similarity; putative; Belongs to the UPF0332 family.
 
     0.936
MJ_1548
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 57.45; identified by sequence similarity; putative; Belongs to the UPF0331 family. MJ1548 subfamily.
   
 
 0.788
MJ_0140
Conserved hypothetical protein; Involved in the archaeal biosynthesis of heme. Catalyzes the oxiation of precorrin-2 into sirohydroclorin (By similarity). Belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
       0.778
hemA
glutamyl-tRNA reductase (hemA); Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
     
 0.775
MJ_0605
Hypothetical protein; Brute force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0605; Belongs to the UPF0332 family.
 
     0.730
MJ_0139.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0139.1.
     
 0.534
MJ_0676
Hydrogenase expression/formation protein (hypE); Similar to GB:X52974 SP:P40599 PID:48737 PID:536795 percent identity: 44.88; identified by sequence similarity; putative; Belongs to the HypE family.
       0.431
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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