STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0165Conserved hypothetical protein; Similar to GP:1653798 percent identity: 43.43; identified by sequence similarity; putative. (256 aa)    
Predicted Functional Partners:
MJ_0830
Conserved hypothetical protein; Similar to PID:1652988 percent identity: 29.67; identified by sequence similarity; putative; Belongs to the LarE family.
  
 0.975
dtdA
Conserved hypothetical protein; D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo.
       0.931
MJ_1387
Conserved hypothetical protein; Similar to PID:1651806 percent identity: 33.88; identified by sequence similarity; putative; Belongs to the LarC family.
 
  
 0.929
MJ_0164
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0164.
       0.927
moaB
Molybdenum cofactor biosynthesis protein (moaB); Catalyzes the adenylation of molybdopterin as part of the biosynthesis of the molybdenum-cofactor.
       0.894
MJ_0163
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0163.
  
    0.887
MJ_0956
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0956.
  
  
 0.767
cbiM
Cobalamin biosynthesis protein (cbiM); Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
    0.571
MJ_1569
Cobalamin biosynthesis protein (cbiM); May be involved in metal transport; Belongs to the CbiM family.
  
    0.571
MJ_1570
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1570.
  
    0.571
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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