STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0183Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0183. (48 aa)    
Predicted Functional Partners:
MJ_0182
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0182.
       0.668
MJ_0184
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0184.
       0.543
MJ_0181
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0181.
       0.500
MJ_0185
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0185.
       0.432
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.