STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hypAHydrogenase expression/formation protein (hypA); Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (124 aa)    
Predicted Functional Partners:
hypB
Hydrogenase expression/formation protein (hypB); Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. Exhibits a low intrinsic GTPase activity, which is essential for nickel insertion; Belongs to the SIMIBI class G3E GTPase family. HypB/HupM subfamily.
 
 
 0.989
MJ_0993
Hydrogenase expression/formation protein (hypD); Similar to SP:P31903 GB:X70183 PID:38775 percent identity: 42.46; identified by sequence similarity; putative; Belongs to the HypD family.
 
  
 0.954
vhuA
Methylviologen-reducing hydrogenase, alpha chain (vhuA); Similar to GB:X61204 PID:44799 PID:1747408 percent identity: 77.03; identified by sequence similarity; putative.
  
 
 0.943
hypF
Hydrogenase expression regulatory protein (hypF); Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.
 
   
 0.942
MJ_0283
Nucleotide-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
   
 
 0.936
MJ_0727
Coenzyme F420-reducing hydrogenase, alpha subunit; Similar to GB:J02914 SP:P19496 PID:551889 GB:AE000666 percent identity: 27.08; identified by sequence similarity; putative.
  
 
 0.936
MJ_0676
Hydrogenase expression/formation protein (hypE); Similar to GB:X52974 SP:P40599 PID:48737 PID:536795 percent identity: 44.88; identified by sequence similarity; putative; Belongs to the HypE family.
 
  
 0.924
MJ_0213
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0213.
  
    0.916
MJ_0120
Urease accessory protein (ureG); Similar to GB:L24101 SP:P42871 PID:431755 percent identity: 34.53; identified by sequence similarity; putative.
  
 
 0.886
MJ_0200
Hydrogenase expression/formation protein (hypC); Similar to GB:L23970 SP:P31881 GB:X63650 PID:39244 PID:398010 percent identity: 40.00; identified by sequence similarity; putative; Belongs to the HupF/HypC family.
  
  
 0.864
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.