STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0272Repressor protein, putative (yorfE); Similar to GP:1536960 percent identity: 40.32; identified by sequence similarity; putative. (79 aa)    
Predicted Functional Partners:
MJ_1243
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 38.71; identified by sequence similarity; putative; Belongs to the UPF0251 family.
     
 0.886
MJ_0173
Conserved hypothetical protein; Putative transcriptional regulator.
      
 0.869
MJ_0271
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0271.
       0.792
wtpA
Conserved hypothetical protein; Part of the ABC transporter complex WtpABC involved in molybdate/tungstate import. Binds tungstate and molybdate (By similarity).
     
 0.485
MJ_1024
Conserved hypothetical protein; Similar to GP:2226130 percent identity: 25.53; identified by sequence similarity; putative.
       0.431
wtpB
Sulfate transport system permease protein (cysT); Part of the ABC transporter complex WtpABC involved in molybdate/tungstate import. Probably responsible for the translocation of the substrate across the membrane (By similarity).
       0.431
pyrK
Cytochrome-c3 hydrogenase, gamma chain; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
       0.431
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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