Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
MJ_0296Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0296. (203 aa)    
Predicted Functional Partners:
MJ_0649
NADH oxidase (nox); Catalyzes the four-electron reduction of molecular oxygen to water.
   
 0.725
MJ_0294
Large helicase-related protein (LHR), probably RNA helicase; Similar to GP:1707782 percent identity: 51.90; identified by sequence similarity; putative; Belongs to the helicase family.
 
     0.624
truA
Pseudouridylate synthase I (truA); Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family.
   
 
 0.596
fdhD
Formate dehydrogenase (fdhD); Required for formate dehydrogenase (FDH) activity. Belongs to the FdhD family.
       0.573
MJ_0871
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 39.58; identified by sequence similarity; putative.
 
    0.545
MJ_1120
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 30.16; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
  
  
 0.525
MJ_0880
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 26.24; identified by sequence similarity; putative.
 
    0.502
MJ_0096
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0096.
   
    0.495
MJ_0882
Conserved hypothetical protein; Probable methyltransferase that uses S-adenosylmethionine as the methyl donor. Binds neither NAD nor NADP in vitro.
 
 
 
 0.461
MJ_0981
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 28.18; identified by sequence similarity; putative.
       0.423
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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