STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0332.1Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0332.1. (132 aa)    
Predicted Functional Partners:
MJ_0333
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0333.
       0.778
MJ_0328
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0328.
       0.751
MJ_0329
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0329.
       0.751
MJ_0330
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0330.
       0.751
MJ_0331
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0331.
       0.751
MJ_0332
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0332.
       0.751
MJ_0334
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0334.
       0.541
MJ_0335
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0335.
       0.420
MJ_0336
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0336.
       0.415
MJ_0337
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0337.
       0.415
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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