STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0345Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0345. (317 aa)    
Predicted Functional Partners:
MJ_0344
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0344.
       0.773
MJ_0342
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0342.
       0.762
MJ_0343
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0343.
       0.762
MJ_0346
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0346.
       0.762
MJ_0347
Conserved hypothetical protein; Similar to GP:1788697 percent identity: 39.77; identified by sequence similarity; putative.
       0.746
MJ_0347.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0347.1.
       0.707
MJ_0348
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0348.
       0.706
MJ_0335
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0335.
       0.478
MJ_0341
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0341.
       0.474
MJ_0336
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0336.
       0.468
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.