STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0354Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0354. (58 aa)    
Predicted Functional Partners:
MJ_0352
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0352.
       0.778
MJ_0353
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0353.
       0.778
MJ_0351
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0351.
       0.689
MJ_0350
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0350.
       0.641
MJ_0355
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0355.
       0.566
MJ_0356
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0356.
       0.566
MJ_0349
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0349; Belongs to the M.jannaschii MJ0023/MJ0349/MJ1072/MJ1074/MJ1107/MJECL16 family.
       0.524
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.