STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0412Nitrate transporter protein (nrtC) homolog (cmpC); Similar to PID:1019380 percent identity: 47.43; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily. (267 aa)    
Predicted Functional Partners:
MJ_0413
Nitrate transporter protein (nrtB) homolog (cmpB); Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.999
MJ_0797
Hypothetical protein; Similar to PID:1653948 percent identity: 28.10; identified by sequence similarity; putative.
      0.902
MJ_1507
Hypothetical protein; Similar to PID:1653948 percent identity: 32.05; identified by sequence similarity; putative.
      0.902
MJ_1181
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1181.
 
  
 0.891
MJ_1180
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1180.
 
  
 0.866
mer
N5,N10-methylene-tetrahydromethanopterin reductase (mer); Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family.
  
  
 0.738
gatA
Amidase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln) (By similarity).
     
 0.679
wtpB
Sulfate transport system permease protein (cysT); Part of the ABC transporter complex WtpABC involved in molybdate/tungstate import. Probably responsible for the translocation of the substrate across the membrane (By similarity).
 
  
 0.633
MJ_0414
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 43.28; identified by sequence similarity; putative.
       0.565
MJ_1241
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1241.
  
  
 0.529
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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